Introduction
简介
Update
更新通告
Downloads
下载
Manual
使用说明
FAQ
常见问题
Contact
联系方式
 

FANSe main program download 主程序下载

 

FANSe is an open-source program and can be compiled in various platforms. Latest release is version 1.7.2.
From 1.7.2 version, FANSe supports only 64-bit operating systems. Nevertheless, you may still compile the source code to run in 32-bit operating systems.

Click the download fields below to download the source code or the pre-compiled binaries which runs readily in windows 7 64-bit. In some AMD CPUs the pre-compiled program may not work smoothly. We recommend you to compile it from the source in this case.

Note that the Linux version is different than the Windows version due to the compiler difference. Compilation was tested successfully on Ubuntu 11.10 and 12.04 (64-bit) using the command-line "gcc fs64linux.c -m64 -o fs64linux".

FANSe是一个开源软件,它可以在各种平台上编译运行。最新版本为1.7.2
从1.7.2版本开始,FANSe只支持64位操作系统。尽管如此,您仍然可以将源代码编译成32位可执行文件,只是我们不能确保它一定能正常工作。

点击下面以下载源代码或预编译的可执行文件(运行于Windows 7 64-bit上)。某些AMD CPU的计算机可能运行会出问题,这种情况下请自行从头编译。

注意,Linux版本和Windows版本源代码不同,因为Linux的编译器不同。我们在Ubuntu 11.10 和 12.04上测试成功Linux版的编译,所使用的命令行是 "gcc fs64linux.c -m64 -o fs64linux".

NEW! FANSe2 released, with unlimited paralellization and more than 500x acceleration without compromising accuracy!

 

FANSe 1.7.2 download:

Platform
操作系统平台

Source Code
源代码

Pre-compiled executives
预编译的可执行程序
Windows 64-bit Download Download
Linux 64-bit Download  

 

 

Obsolete versions 旧版本

FANSe 1.7.1

Platform
操作系统平台

Source Code
源代码

Pre-compiled executives
预编译的可执行程序
Windows 32-bit Download Download
Windows 64-bit Download Download
Linux 64-bit Download Download
 

Notes:

  • Due to the difference of the instruction in 32-bit and 64-bit windows platforms, the source codes are different. The memory consumption in 64-bit windows is slightly higher.
  • Due to the difference of libraries in windows and linux platforms, the source codes are slightly different.
  • The programs are tested in Windows 7 (32-bit and 64-bit) and Ubuntu 10.04 and 10.10
  • It is strongly recommended to use the 64-bit version for 10-35% speed-up and the support forlarger reference genome..

注意:

  • 因为32位和64位Windows系统字长不同,源程序也有不同。64位windows版的内存耗用要略高。
  • 因为Windows和Linux的库有所不同,因此源程序也有不同。
  • 这些程序在Windows 7 32-bit/64-bit下以及Ubuntu 10.04/10.10下测试通过。
  • 我们强烈建议使用64位版本,可以得到10-35%的速度提升,还能支持更大的参考基因组。

 



 

FANSe Utilities Download 实用小工具下载

 

We developed some small but useful utilities to help you using FANSe and process your deep sequencing data more easily, especially under Windows platforms. Click the title of the utility to download. Some programs need Microsoft .NET framework 3.5 or higher. If necessary, please download from Microsoft's webpage (free).

我们开发了一系列实用小工具以帮助使用FANSe和处理大规模测序数据集,尤其是在Windows平台下!点击下面这些程序的名称即可下载。
一些程序需要使用到微软.NET Framework 3.5以上版本。您可以到微软官网上免费下载。

 

FANSe2SAM .NET Framework User Interface

FANSe2SAM converts the FANSe output to SAM format. This is just a preliminary version and do not export CIGAR string.
FANSe2SAM 将FANSe比对结果转换为SAM格式。注意此程序只是一个预览版本,并不输出CIGAR字符串。

4.0 GUI
     
     

 

 


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